Parasites & Vectors
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Preprints posted in the last 90 days, ranked by how well they match Parasites & Vectors's content profile, based on 57 papers previously published here. The average preprint has a 0.06% match score for this journal, so anything above that is already an above-average fit.
Stewart, A. T. M.; Hamid-Adiamoh, M.; Sun, L.; Njoroge, T. M.; Winter-Reece, N.; Feng, R. S.; Singh, S.; James, L. D.; Sofhauser, B.; Dille, C.; Mohammed, A.; Severson, D. W.; Duman-Scheel, M.
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BackgroundAttractive Targeted Sugar Baits (ATSBs) are a promising, environmentally friendly approach for mosquito control, but the direct field application, scalability and long-term effectiveness of ATSBs across diverse mosquito species remain significant challenges. Methodology/Principal FindingsWe assessed the efficacy of a genetically engineered RNA interference (RNAi) yeast strain (Sh.463_56.10R) formulated in three sugar baits, soda (Coca-ColaTM), 10% sucrose, and a commercial mosquito bait (BaitStabTM), on Aedes, Anopheles and Culex mosquitoes. All RNAi yeast bait formulations induced significantly higher mean mortality (87-100%) compared to the control groups (0-9%; P<0.0001), but mosquitoes exhibited a higher feeding preference for RNAi yeast-soda baits, which induced mortality rates of 94-100% (P < 0.0001) recorded across all mosquito species. Additionally, to assess the competitiveness of the RNAi yeast-soda bait to other tropical sugar sources, semi-field choice assays were conducted in Trinidad, West Indies using competing flowering plants and fruits typically found in residential environments. The RNAi yeast-soda ATSB continued to perform well in the presence of competing floral and fruit sugar sources during both Aedes albopictus and Culex quiquefasciatus trials, though the presence of several fruits and flowers did reduce A. aegypti mortality, suggesting that further field testing will be necessary. The residual activity of the Sh.463_56.10R + soda formulation was retained for at least 14 months, with sustained 100% mortality in C. quinquefasciatus and 93-100% mortality in Aedes aegypti, Anopheles gambiae and Anopheles stephensi. The RNAi yeast-soda ATSB also performed well in semi-field studies performed with a prototype soda bottle feeder. Conclusions/SignificanceThis study demonstrates the potential of soda-baited RNAi yeast as a potent, long-lasting, and scalable platform for ATSB-based mosquito control as a component of integrated vector management programs. Author SummaryMosquito-borne diseases continue to affect millions of people worldwide, and current mosquito control methods face challenges such as low public uptake, insecticide resistance and environmental concerns. Here we evaluated a new and environmentally friendly approach to mosquito control using ATSBs. We tested genetically engineered species-specific yeast producing RNAi molecules capable of killing mosquitoes that feed on it. We mixed the yeast with three different sugar baits, including soda (Coca-ColaTM), 10% sucrose, and the commercial mosquito bait BaitStabTM formulation, and evaluated how well they worked against different mosquitoes. The results showed that the RNAi yeast mixed with soda was the most effective, killing up to 100% of mosquitoes in laboratory and outdoor tests. The bait remained effective in the presence of many competing natural tropical fruit and floral sugar sources. Remarkably, the bait, which can be delivered in a soda bottle feeder, stayed active for at least 14 months under simulated field conditions. These findings suggest that soda-based RNAi yeast baits could provide a practical, long-lasting and scalable tool for mosquito control and may help strengthen future strategies to reduce mosquito-borne diseases.
Almanza, J.; Montenegro, D.
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BackgroundOviCol has recently been proposed as a disruptive strategy for the surveillance and control of synanthropic Aedes mosquitoes, vectors of dengue, Zika, and chikungunya viruses. The approach integrates monitoring and control through ultra-low-cost ovitraps ([~]0.2 USD), bioattractants, and egg inactivation using hot water. However, large-scale ovitrap surveillance generates thousands of egg substrates that require time-consuming manual counting, creating a major operational bottleneck. To address this limitation, we developed Col-Ovo, an artificial intelligence-based tool for automated counting of Aedes aegypti eggs from real field samples, together with OviLab, a digital platform for annotation, curation, and management of entomological image datasets. Methodology/Principal FindingsThe detection model was trained using YOLOv11m on a dataset of 275 oviposition substrates (20.5 cm strips) collected under routine operational conditions. Images were captured in situ without preprocessing and included substrates heavily stained by bioattractants such as blackstrap molasses and dry yeast (Saccharomyces cerevisiae), as well as sand and particulate debris, reflecting realistic field conditions. The system was designed to operate with standard smartphone images and tolerate compression artifacts produced by messaging platforms such as WhatsApp. Performance was evaluated by comparing automated egg counts with expert manual counts and with virtual-human counts conducted in OviLab using >200% image magnification. Col-Ovo achieved >95% agreement with expert counts and 88% agreement with OviLab while reducing processing time from approximately 15 minutes to <3 seconds per sample. Conclusions/SignificanceCol-Ovo enables rapid, scalable quantification of Ae. aegypti eggs from smartphone images, addressing a critical operational barrier in ovitrap-based surveillance. The system requires no image preprocessing or specialized hardware and is accessible through a lightweight web interface supported by an AI architecture that allows retraining for new ecological contexts or additional Aedes species. Integrated with OviLab, this platform provides a flexible digital infrastructure that can strengthen routine vector surveillance and community-level control programs across regions where Aedes mosquitoes continue to expand. Author SummaryMosquitoes that transmit dengue, Zika, and chikungunya are expanding in many parts of the world. Monitoring their populations is essential for guiding prevention and control actions. A common surveillance method uses small traps where female mosquitoes lay their eggs. By counting the eggs collected in these traps, health programs can estimate mosquito abundance and detect increases in risk. However, the eggs are extremely small: about 0.065 mm{superscript 2}, and are usually counted manually under magnification. This process is slow, requires trained personnel, and limits how many samples can be analyzed in routine surveillance. In this study, we developed a digital tool that automatically counts mosquito eggs from photographs taken with a smartphone. The system was trained using images collected under real field conditions, including samples with stains, dirt, and other materials commonly found in mosquito traps. The tool can analyze images even when they are compressed and shared through WhatsApp. By reducing counting time from 15 minutes to only a 25 seconds, this approach can help strengthen mosquito surveillance and support faster responses to mosquito-borne disease risks.
Carabajal, M. P. A.; Fernandez Salom, M. J.; Martinez, L. J.; Marcial, E. R.; Albarracin, V. H.; Cantiello, H. F.
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Helminthiases remain a major global health burden, and limitations of current anthelmintic therapies highlight the need for new pharmacological targets. In this study, we examined the effects of ion-channel and cytoskeletal modulators on bovine lung protoscoleces (PSCs) of Echinococcus granulosus sensu lato. Compounds acting on ion channels (praziquantel, amiloride, and amlodipine) and cytoskeletal components (albendazole and cytochalasin D) were evaluated using a semi-automated motility assay, methylene blue exclusion to assess viability, and scanning electron microscopy (SEM) to characterize structural damage. All compounds produced concentration-dependent reductions in PSCs motility. Amlodipine was the most potent inhibitor of motility, whereas praziquantel and cytochalasin D produced pronounced tegumental alterations and strong correlations between motility impairment and parasite death. In contrast, amiloride markedly reduced motility with comparatively minor effects on viability, indicating a primarily paralytic effect. Cytoskeletal disruption induced severe structural damage and parallel declines in motility and viability. SEM analysis revealed extensive tegumental collapse, loss of glycocalyx, and microtrichial damage in PSCs exposed to cytoskeletal and calcium-modulating agents. These findings highlight cytoskeletal organization and calcium-dependent ion fluxes as key physiological vulnerabilities in E. granulosus. Comparative analysis of these pharmacological targets provides mechanistic insight into how disruptions in cytoskeletal dynamics and cation homeostasis compromise parasite motility and survival.
Sauer, F. G.; Joest, H.; Sulesco, T.; Duve, P.; Loc, D. H.; Nolte, K.; Luehken, R.
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Accurate species identification is crucial to assess the medical and veterinary relevance of a mosquito specimen, but it requires high experience of the observers and well-equipped laboratories. This study aimed to evaluate whether low-cost imaging in combination with geometric wing morphometrics can provide accurate identification of invasive, morphologically similar Aedes species. The right wings of 670 female specimens covering 184 Ae. aegypti, 156 Ae. albopictus, 166 Ae. j. japonicus and 164 Ae. koreicus, were removed, mounted and photographed with a professional stereomicroscope (Olympus SZ61, Olympus, Tokyo, Japan) and a macro lens (Apexel-24XMH, Apexel, Shenzhen, China) attached to a smartphone. The coordinates of 18 landmarks on the vein crosses were digitalized by a single observer for each image. In addition, the landmarks of 20 specimens per species and imaging device were digitalized by six different observers to assess the degree of the observer error. The superimposed shape variables were used to compare the species classification accuracy of linear discriminant analysis (LDA), support vector machine (SVM), Random Forest (RF), and XGBoost. In the single-observer landmark data, the LDA achieved the best classification results with a mean accuracy of 95 % for landmarks from microscope images and 92 % for those obtained from smartphone images. In the multi-observer landmark data, LDA consistently performed worse than the other three classifiers, and the reduction in the accuracy was more pronounced for smartphone images than for microscope images. This pattern was associated with a higher degree of observer error for smartphone images, as confirmed by a landmark-wise comparison across all landmarks. Geometric wing morphometrics provides a reliable method to distinguish the most common invasive Aedes species in Europe. Thereby, the image quality obtained by smartphones equipped with a macro lens is sufficient and represents a cost-effective alternative to professional microscopes. However, due to the greater degree of observer variation for smartphone images, landmark coordinates for such images should ideally be collected by a single observer.
Munoz, A. M.; Mejia-Jaramillo, A. M.; Lowenberger, C.; Rodriguez, K. S.; Triana-Chavez, O.
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Insecticide spraying is a common strategy for controlling dengue outbreaks, but its effectiveness is compromised by the development of resistance in mosquito populations. In this study, we subjected a strain of Aedes aegypti known for its exceptional ability to develop resistance to controlled permethrin and lambda-cyhalothrin insecticides pressure using two different concentrations. We analyzed resistance mechanisms that are enhanced at each concentration and used RNA sequencing to identify transcripts specifically associated with these exposure levels. Our objective was to uncover the molecular mechanisms triggered by different insecticide concentrations and to distinguish responses between type I and type II pyrethroids, which differ in chemical structure. Our results showed that kdr mutations confer only moderate levels of resistance, as do detoxifying enzymes. For lambda-cyhalothrin, we identified genes involved in the electron transport chain, mitochondrial function, and overall responses to oxidative stress. tRNA transcripts were also upregulated, along with mitochondrial and stress-response transcripts, suggesting a metabolic shift, particularly toward maintaining homeostasis under oxidative stress. These changes point to mechanisms that sustain resistance to this type II insecticide beyond direct detoxification in this population. On the contrary, permethrin induced marked overexpression of cuticle genes, CYP450 genes (especially CYP4), and Odorant Binding Proteins. These expression patterns, together with metabolic enzymes, point to detoxification, reduced penetration, or even sequestration of insecticide, all of which intensify with increasing concentrations. This overregulation of genes suggests an integrated response complemented by classical metabolic detoxification and accompanied by overregulation of mitochondrial complexes. We showed that despite the shared mode of action of the insecticides permethrin and lambda-cyhalothrin, they elicit distinct responses in this Ae. aegypti population. We also showed that the transcriptomic response depends on insecticide concentration and may modulate insecticide tolerance. This article advances understanding of the complexity of pyrethroid resistance in Aedes aegypti and underscores the importance of considering both the insecticide type and the concentration used in vector control programs. Author summaryAedes aegypti mosquitoes transmit dengue and other arboviruses, being a major public health problem in tropical regions like Colombia, where control relies on pyrethroid insecticide spraying. Based on reports of inconsistent results in the field due to different effects of insecticide concentrations, we recreated variable doses by exposing a resistant Colombian Aedes aegypti strain to low (LC25) and high (LC75) concentrations of permethrin (type I) and lambda-cyhalothrin (type II) to identify concentration-dependent resistance mechanisms. Using genetic mutation analysis, enzyme activity assays, and RNA sequencing, we identified the molecular mechanisms these mosquitoes use to survive. Knockdown resistance (kdr) and detoxification enzymes contributed to some extent to resistance but varied by insecticide type and concentration. RNAseq identified that lambda-cyhalothrin upregulated genes for mitochondrial energy production, oxidative stress defense, immune signaling, and transfer RNAs, facilitating homeostasis under chemical stressors. Permethrin instead upregulated genes for cuticle thickening, cytochrome P450 enzymes, and odorant-binding proteins, which are associated with improved penetration barriers, and metabolic breakdown that intensified with higher concentrations. This reveals pyrethroid resistance as complex beyond classic mechanisms, as even low field doses favor stress tolerance or physical defenses to evade sprays. We detected transcripts that improve survival at high concentrations and could be selected in these mosquitoes. Carefully selecting the type of pyrethroid to be used and the dose should be an important factor in vector control. This optimizes current interventions, prolongs their efficacy, and aids researchers in modeling resistance to protect communities.
Matsuda, I.; Manin, B. O.; Yahiro, T.; Lambut, P.; Tangah, J.; Huffman, M. A.; Bernard, H.; Subbiah, V. K.; Chua, T. H.
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Understanding how vector ecology intersects with host behaviour is essential for predicting zoonotic disease risk in tropical ecosystems. We conducted a two-year field study (November 2016-October 2018) in a riverine forest in Sabah, Malaysian Borneo, to characterize mosquito communities and the spatial distribution of potential simian-malaria vectors. Mosquitoes were sampled on 44 nights using CO{square}-baited light traps repeatedly deployed along a 500 m transect at three distances from the river (0, 250, 500 m) and two vertical strata (ground and canopy), yielding 244 trap collections across repeated sampling nights. In total, 9,928 mosquitoes were collected, dominated by Culex spp. (9,079; 91.4%), whereas Anopheles spp. were rare (153; 1.5%); most remaining specimens were unidentified to genus, and species-level identification was limited primarily to Anopheles. Nevertheless, female Anopheles (n=57) were more frequently detected near the river and less commonly at intermediate distance, and tended to be captured more often in ground traps. Zero-inflated negative binomial GLMMs based on the full mosquito dataset indicated significant effects of river distance and height on mosquito abundance, while night-time temperature and humidity showed no detectable effects. The zero-inflated structure of the data further suggested that many zero captures reflected true absence rather than sampling variability. The Anopheles assemblage was dominated by An. balabacensis, and molecular screening of 57 females detected simian Plasmodium DNA in two individuals. Overall, these findings suggest that river-edge habitats may represent localized areas where vectors persist and where primates and human activities overlap, creating repeated opportunities for host-vector contact even when vector densities are low.
Houda, H. B. M.; Bonhomme, R.; Renois, F.; Deschamps, M.-H.; Benoit-Biancamano, M.-O.; Meurens, F.
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The tropical house cricket Gryllodes sigillatus is a major species used in the edible insect farming industry. Despite the rapid expansion of this sector, diagnostic tools for detecting infections in these species remain limited. The lack of validated reference genes compromises the reliability of RT-qPCR-based gene expression analyses, which are essential for the development of molecular tools for disease diagnosis and health monitoring in insect production systems. To address this gap, we evaluated the expression stability of six candidate reference genes (ACTB, EF1, GAPDH, HisH3, RPL5, and 18SrRNA) across four body parts (abdomen, head, legs, and whole body) using a combination of complementary statistical approaches, including geNorm, NormFinder, BestKeeper, the {Delta}Ct method, the R statistical environment, and the integrated RefFinder tool. Candidate genes were identified and annotated using the recently published G. sigillatus genome, through sequence comparisons with closely related insect species using BLAST and reciprocal BLAST analyses, multiple sequence alignments. All procedures complied with MIQE 2.0 guidelines to ensure methodological rigor and transparency. The results showed that ACTB, EF1, RPL5, and 18SrRNA exhibited stable and consistent expression across all analyzed tissues, whereas GAPDH and HisH3 displayed high variability and were generally unsuitable for normalization, except in head tissue where GAPDH remained stable. This study provides the first validated set of reference genes for G. sigillatus, establishing a robust foundation for accurate, reproducible, and comparable gene expression analyses. Furthermore, these findings support the development of RT-qPCR-based diagnostic tools, contributing to improved health monitoring and biosafety in insect production systems.
Garamszegi, L.; Nagy, G.; Klein, A.; Szentivanyi, T.; Vasarhelyi, Z.; Marko, G.; Zsebok, S.; Soltesz, Z.
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Ultra-low volume (ULV) insecticide spraying with deltamethrin as the active ingredient is widely used in mosquito control programs, yet its effectiveness against target mosquitoes and its ecological side effects remain poorly quantified under field conditions in Central Europe. Here, we experimentally evaluated the short-term impact of ground ULV spraying on both mosquito populations and non-target flying insects in Hungary using a paired before-after-control-impact (BACI) design. Mosquitoes were sampled with BG Sentinel traps, while non-target insects were collected using malaise traps. ULV treatment resulted in a significant reduction in mosquito abundance at treated sites, with an average decline of approximately 45%. Native and invasive mosquito species, including Aedes albopictus and Aedes koreicus, showed similar proportional decreases. However, treatment effectiveness varied substantially among sites and was influenced by initial mosquito abundance and wind conditions. In parallel, malaise trap samples revealed a marked decline in non-target flying insects, with reductions exceeding 40% across multiple taxonomic groups, particularly among small- and medium-sized insects, and also when considering pollinator taxa together. Our results indicate that while ULV spraying can temporarily reduce mosquito abundance, it also imposes considerable short-term impacts on non-target insect communities, highlighting trade-offs between vector control and insect conservation within mosquito management programs.
Duarte, J. d. S.; Pereira, G. M.; Oliveira, I. J. W.; Titze de Almeida, S. S.; Schumacher-Schuh, A. F.; Rieder, C. R. d. M.; Valenca, G. T.; Brandao, P. R. d. P.; Krejcova, L. V.; Santos-Lobato, B. L.
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Background: Household insecticides are widely used for domestic pest control, yet exposure patterns in traditionally underserved populations remain poorly characterized. In the Brazilian Amazon, data on use patterns among older adults living in riverine communities are particularly scarce. Objective: To describe the prevalence, frequency, duration, application practices, and types of household insecticides used by older adults living in near-urban riverine insular communities in the Brazilian Amazon. Methods: Cross-sectional, population-based door-to-door survey conducted from August 2022 to July 2025 in four islands (Cotijuba, Mosqueiro, Outeiro, and Combu) in the city of Belem, Brazil. All residents aged 60 years or more registered in the primary care system were invited to participate. Trained interviewers administered an in-person standardized questionnaire to participants on current household insecticide use, frequency, duration, self-application, protective equipment, insecticide types, and product brands. Results: Among 1,101 screened individuals, 1,084 were included (median age at evaluation: 68 years). Overall, 78.4% reported current use of household insecticides. Weekly or more frequent use was reported by 58.9%, and 33.4% reported use for more than 5 years. Self-application was common (57.5%), whereas use of protective equipment was rare (8.2%). Aerosol sprays were the most frequently reported type (39.4%). Commonly recalled aerosols contained pyrethroid mixtures including cypermethrin, imiprothrin, prallethrin, and transfluthrin. A substantial proportion of participants reported using unregulated products and veterinary-only insecticides for household purposes. Conclusions: Household insecticide use is highly prevalent and frequent in Amazonian riverine communities, with minimal use of protective equipment and substantial irregular practices, underscoring the need for targeted risk communication and surveillance.
Kokkas, E.; Jones, J.; Weetman, D.; Lycett, G.; Paine, M. J. I.; Anastasaki, E.; Silva Martins, F.; Hill, T.; Cowlishaw, R.; Anthousi, A.; Colman, F.; Ismail, H.; Logan, R. A. E.; Milonas, P.; Vontas, J.; Ranson, H.; Lees, R. S.; Grigoraki, L.
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Spatial emanators (SE) are a promising complement to existing tools for preventing mosquito transmitted diseases. In 2025, the WHO updated the WHO Guidelines for Malaria to include a conditional recommendation for the indoor use of prequalified SE products in malaria control. Both prequalified, and many other SE products contain the volatile pyrethroid transfluthrin, which shares the same target site as other (contact/solid phase) pyrethroids. Therefore, an assessment of cross resistance is critical to predict effectiveness against mosquitoes with existing pyrethroid resistance. Our results show that resistance to solid phase pyrethroids is correlated with resistance to transfluthrin in Anopheles and Aedes species. Moreover, commonly-selected resistance mechanisms including target site mutations and over-expression of P450 detoxification enzymes can confer resistance to transfluthrin. Furthermore, we show that resistant mosquitoes are less impacted by transfluthrin in terms of flight activation (irritancy) and reduced blood feeding inhibition, with the response correlating with resistance strength. Transfluthrin did not elicit an electroantennography response in Anopheles gambiae and surgically ablating mosquitoes antennae did not result in differences in flight activation upon transfluthrin exposure, suggesting the antennae are not required for transfluthrin to elicit behavioral responses. These results provide new insight regarding the mode of action of transfluthrin and the risk of resistance reducing transfluthrins efficacy in vector control interventions.
Lemant, J.; Tarroux, A.; Smith, T. A.; Zogo, B.; Golumbeanu, M.; Odufuwa, O. G.; Irish, S.; Moore, S. J.; Pothin, E.; Champagne, C.
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BackgroundThe malaria transmission potential and the vulnerability of Anopheles mosquitoes to different vector control methods depend, among other factors, on the endophily, endophagy, anthropophagy and survival of each species. Local information on these bionomic parameters is generally unavailable. MethodsTo address this, we estimated species-specific values of these parameters using an augmented version of the global database of bionomics data by Massey et al. (2016). We applied inclusion and exclusion criteria to select eligible studies with relevant experimental designs that minimise bias from collection methods for parous, sac, endophagy, and endophily rates as well as for the resting duration. For the human blood index (HBI), we separated data from indoor and outdoor collections. We fitted hierarchical Bayesian models with levels based on Anopheles taxonomy to estimate these quantities. Based on the estimated bionomics, we quantified the expected vectorial capacity reduction after the introduction of a pyrethroid-pyrrole insecticide-treated net (ITN) for 57 Anopheles species. ResultsWe identified 26 eligible studies for endophagy and 61 for the parous rate, leading to a Bayesian posterior average for the Anopheles genus of 42% (95% credible interval: 18-70) and 55% (32-77) respectively. HBI values widely varied depending on the location of collection, except for some species showing strong anthropophilic behaviours. Resting duration was estimated to be 2.1 days (1.2 - 4.8) at the genus level. Few studies were available to estimate the sac and endophily rates, which prevented us from deriving precise estimates for the whole Anopheles genus. Our estimates of the vectorial capacity reduction following the introduction of a pyrrole-pyrethroid ITN ranged between 48% and 76% across species, highlighting the important differences among mosquito species in vulnerability to vector control interventions. ConclusionThis work demonstrates how data from both Anopheles species complexes and individual species can be leveraged to generate species-specific estimates of bionomic parameters, capturing the local characteristics and behaviour of malaria vectors. The dataset is readily updatable as new data become available. However, more frequent and standardised field surveys are still needed to accurately characterise local vector behaviour.
Pradhan, S. K.; Morrow, J. L.; Tilden, G.; Bidari, F.; Bynakal, S.; Ramasamy, A.; Riegler, M.
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Insects are associated with diverse RNA viruses, including vertically transmitted viruses that form persistent infections without apparent symptoms. One of the first documented vertically transmitted viruses is sigmavirus (Rhabdoviridae) affecting fitness of Drosophila. Sigmaviruses and related rhabdoviruses have also been detected in pest fruit flies and other arthropods. However, their prevalence, transmission, tissue localisation and fitness effects remain poorly known, despite their potentially common infections in diverse hosts. We investigated Sigmavirus tryoni (BtSV) prevalence, load, transmission across multiple generations and host effects in Queensland fruit fly (Bactrocera tryoni), Australias most significant horticultural pest, which carries BtSV at low prevalence (13.7%) across field populations. We detected BtSV in 6 of 12 laboratory populations (prevalence 12.5% to 80.4%) where it was transmitted biparentally within embryos. Although incomplete, maternal transmission was more reliable and resulted in higher BtSV load than paternal transmission. Paternally transmitted BtSV was almost entirely lost after two generations. BtSV became detectable in most uninfected individuals cohabiting with infected flies, but this resulted in a low load that was subsequently transmitted to only few offspring. BtSV occurred across developmental stages, digestive and reproductive tissues, albeit its viral load was lower in reproductive tissues when received paternally than maternally, and lower in testes than ovaries. Furthermore, BtSV-infected individuals suffered paralysis and mortality when exposed to high CO2 concentrations, a Rhabdoviridae effect previously reported for several Drosophila species, a muscid fly and mosquitoes. Our study suggests that sigmavirus transmission dynamics and fitness effects may apply broadly to arthropod hosts and affect their management.
Rubio-Palis, Y.; Feng, L.; Liang, K. S.; Song, C.; Wang, S.; Duchnicki, T.; Zhang, X.; Bravo de Guenni, L.
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Entomological surveillance plays a crucial role in areas where malaria remains endemic, yet gathering data on mosquito populations is often expensive and complicated, particularly in remote locations with challenging logistics and inconsistent sampling schedules. Access to extensive time series data on mosquito species at specific sites would greatly enhance insights into seasonal trends and the biting habits of vectors of malaria parasites. Gaps in mosquito count records pose a significant challenge for researchers and public health officials seeking to establish early warning systems and effective vector control programs. In this study, we apply quantitative machine learning techniques to address missing data in estimates of mosquito abundance collected from 2009 to 2016 in Bolivar State, Venezuela. We evaluated Linear Regression, Stochastic Linear Regression, K Nearest-Neighbor, and Gradient Boosting methods for imputing missing counts of Anopheles mosquitoes, employing a leave-one-out cross-validation strategy. Additionally, we developed a predictive malaria transmission model incorporating mosquito abundance and climate variables (El Nino 3.4 Index, rainfall, and mean air temperature) as covariates. Our generalized time series model forecasts malaria incidence of Plasmodium vivax and Plasmodium falciparum based on climate dynamics and imputed mosquito data. Model performance was assessed using root mean square error, mean absolute error, and mean absolute percentage error. The final results demonstrated that machine learning imputation significantly improved the accuracy and reliability of P. vivax malaria incidence predictions but failed to predict P. falciparum incidence. The study demonstrates that method choice significantly influences the reconstruction of seasonal abundance patterns and the performance of malaria incidence models. Nevertheless, the proposed models strengthen the foundation for targeted interventions and surveillance in endemic regions. Despite limitations in data continuity and coverage, the findings highlight the value of combining multiyear entomological data sets with robust imputation and sensitivity analyses to improve predictive modeling in resource-constrained, malaria-endemic settings.
Amaral, L.-J.; Ukety, T.; Upenjirwoth, J.; Wonyarossi, D. U.; Mandro, M. N.; Nyisi, F.; Adroba, P.; Stolk, W. A.; Fodjo, J. N. S.; Basanez, M.-G.; Laudisoit, A.; Colebunders, R.
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BackgroundOnchocerciasis remains a public-health challenge in the Democratic Republic of the Congo (DRC). The Kakoi-Koda focus, Ituri Province, exhibited high endemicity in the early 2000s and received community-directed treatment with ivermectin (CDTI) in some health zones (e.g., Nyarambe), but not in others (e.g., Logo). Moxidectin clinical trials were conducted in these health zones, alongside onchocerciasis-associated epilepsy studies. MethodologyWe synthesised epidemiological (including nodule prevalence), entomological and CDTI programmatic data. We collated anti-Ov16 serological data from epilepsy-related studies (community, cohort, case-control designs, 2015-2021) and skin-snip microscopy results from two moxidectin trial screenings (2009-2011; 2021-2023) and epilepsy-related studies (2015-2017). Geospatial analyses were used to describe land-cover change relevant to vector ecology and to identify areas with recent transmission. Principal findingsOnchocerca volvulus transmission declined markedly over time. In CDTI-naive Logo villages, microfilarial prevalence fell from 69-79% (first trial, 2009-2011) to 9% (second trial, 2021-2023), and mean infection intensity from 17-26 to 1 microfilariae per skin snip, similar to declines observed in Nyarambe villages under CDTI (72% to 3% and 11 to 0.4, respectively). Anti-Ov16 seroprevalence among children aged 3-10 years was low (0-5%) from 2016 onwards, and seropositivity was geographically circumscribed, mirroring contemporary skin-snip results. Human landing catches and breeding-site prospections (2015-2017) identified Simulium dentulosum and S. vorax as the current anthropophagic species, with no evidence of S. neavei after 2009. Progressive deforestation and canopy opening provide a plausible mechanism for a shift from crab-associated S. neavei habitats towards more open-habitat vectors. SignificanceConsistent parasitological, serological, entomological and geospatial evidence indicates substantially reduced transmission across Kakoi-Koda, with spatially-circumscribed residual transmission. Whether the current simuliid species can sustain transmission above elimination thresholds remains uncertain. Targeted, integrated surveillance is warranted to guide CDTI and stop-CDTI decisions. The dataset assembled here can be used to inform transmission modelling of these dynamics. Author SummaryOnchocerciasis, also known as river blindness, is a parasitic disease of public health concern in sub-Saharan Africa, transmitted by blackfly vectors. The disease is responsible for skin and eye clinical manifestations and is associated with neurological complications. We investigated an area in north-eastern Democratic Republic of the Congo called the Kakoi-Koda onchocerciasis focus, where the infection was once common. We reviewed and assembled data from past studies on infection in humans and blackflies, and analysed satellite imagery to assess the loss of tree cover that can affect where blackflies live and breed. We found that the prevalence of onchocerciasis in Kakoi-Koda has declined markedly in recent years. This decline appears linked to the disappearance (by deforestation) of the habitat suitable for some blackfly species, and to ivermectin distribution to treat onchocerciasis in parts of the focus. Our findings help to understand why onchocerciasis has decreased across the Kakoi-Koda focus and highlight a small number of fast-flowing river segments where other blackfly species may allow small pockets of local transmission. These results support continued, targeted monitoring to determine whether the disease is still transmitted in specific locations where elimination interventions may be needed.
Poyer, S.; Akiko Tangena, J.-A.; Mechan, F.; Worges, M.; Sternberg, E.; Koenker, H.; Fornadel, C.; Kilian, A.
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Background: The lifespan of insecticide-treated nets (ITNs) varies widely across settings, reflecting both intrinsic product characteristics and external factors related to use, care, and environment. While the resistance to damage (RD) score captures intrinsic product durability, there is no standardized metric to quantify contextual risks. This study presents a proof of concept for the Risk Index (RI), a composite measure of site-level risk factors for ITN physical durability and survival. Methods: We conducted a secondary analysis of durability monitoring data from 44 sites across 15 countries in sub-Saharan Africa, covering 14 ITN products. The RI was calculated as a weighted composite of 12 indicators spanning net handling, net care attitudes, and use environment. Associations between RI and median ITN survival were assessed using weighted linear regression and multivariable mixed-effects models adjusting for RD score, with country included as a random effect. Results: RI scores ranged from 25.1 to 83.7 across study sites. In bivariable analysis, a 10-point decrease in RI was associated with a 4.0-month increase in median ITN survival (95% CI: 1.7-6.3; p=0.001). In multivariable analysis adjusting for RD, this association remained significant but attenuated to 2.2 months (95% CI: 0.1-4.2; p=0.037). Independently, a 10-point increase in RD score was associated with a 3.5-month increase in survival (95% CI: 1.3-5.7; p=0.001). No interaction was observed between RI and RD. Predicted survival differed by approximately one year between the lowest- and highest-risk settings. Conclusion: The RI provides a standardized measure of contextual risk factors affecting ITN lifespan, independent of ITN product type. When used alongside a product's RD score, the RI enables improved interpretation of expected site-level variation in net performance. This combined framework offers a practical basis for incorporating behavioural and environmental risk into vector control planning and for tailoring ITN strategies to local conditions.
de Andrade Tavares, L.; Garcia, A. C.; Bell-Sakyi, L.; Fontenele de Brito, T.; Pane, A.
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Rhodnius prolixus is a primary insect vector of Trypanosoma cruzi, the causative agent of Chagas disease, a neglected parasitosis endemic in Latin American countries. It has been estimated that Chagas disease affects 7-8 million people worldwide and is responsible for approximately 1000 deaths per year. Genetic and molecular studies in this species remain challenging due to its life cycle and feeding habits, thus hindering the development of new strategies to control their populations and reduce the diffusion of Chagas disease. Recently, two stable cell lines - RPE/LULS53 and RPE/LULS57 - were derived from Rhodnius embryos, which represent promising new tools to investigate the genetics of this insect vector. Here, we describe their gene expression landscapes through transcriptomic approaches. We show that 8,968 expressed genes are shared between the two cell lines, whereas 391 and 1,088 genes are uniquely expressed in RPE/LULS53 and RPE/LULS57, respectively. Although key components of primary developmental, immune and redox signaling pathways are expressed in both cell lines, some genes such as Frizzled-10-a-like and catalase show marked differences in expression. Our results strongly suggest that RPE/LULS53 and RPE/LULS57 likely represent two different cell phenotypes. Consistent with this, gene ontology analysis reveals that RPE/LULS53 is enriched for animal organ morphogenesis and stress response, while RPE/LULS57 for DNA-directed RNA polymerase activity, among others. Despite these differences, both cell lines express comparable levels of transcripts from resident transposable elements, including the highly abundant Mariner and LINE/I elements, as well as horizontally transferred transposons. Our findings shed light on the nature of the RPE/LULS53 and RPE/LULS57 embryo-derived cell lines and provide valuable transcriptomic resources for future genetic and functional studies in Rhodnius and other triatomine insect vectors. Author summaryRhodnius prolixus is a blood-feeding insect and a major vector of Chagas disease, a parasitosis endemic in Latin America and affecting millions of people worldwide. In the absence of effective drugs and vaccines, the control of the insect population represents a promising strategy to reduce the diffusion of the disease. Yet, genetic and functional studies in Rhodnius are extremely challenging due to its feeding habit and life cycle. To overcome these limitations, researchers have previously developed two stable cell lines derived from Rhodnius embryos. In this study, we provide the first characterization of the genes expressed in these cell lines. We found that, while the two cell lines share many expressed genes, each of them also has distinct gene expression patterns pointing to two different cell types with specialized functions. These differences likely affect the way they respond to stress and regulate biological processes. Our findings provide an important resource for researchers studying Rhodnius prolixus and other insect vectors, helping advance our understanding of the genetic and molecular mechanisms that control the insect development and mediate the interactions between insect vectors and the parasites they transmit
Kipingu, A. M.; Kiware, S. S.; Haydon, D. T.; Johnson, P. C. D.; Viana, M.
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BackgroundUnderstanding population dynamics is fundamental to predicting species persistence and extinction, yet remains challenging due to the complex interplay between ecological, environmental and anthropogenic factors. Population dynamics are regulated by intrinsic factors such as negative density-dependence and Allee effects. While negative density-dependence is a well-understood process, Allee effects have received less attention but can have important implications for conservation and species management. For control of disease vectors, negative density-dependence and Allee effects can drive vectors to elimination or to rebound after control. For malaria mosquitoes, negative density-dependence at the larval stages is well known to limit population growth, but the implications of Allee effects and the trade-offs between negative density-dependence and Allee effects remain unknown. It is hypothesised that, depending on the vector control strategy, Allee effects could be triggered and push populations closer to extinction. MethodsA stochastic state-structured population simulation model was developed, which followed a simplified mosquito life cycle. Negative density-dependence and Allee effects were included as parameters influencing larval survival and total fecundity, respectively. The aims were addressed by varying the strength of negative density-dependence and Allee effects parameters, independently and simultaneously, under different vector control scenarios: control, sustained and shorter-term interventions (here, immolating larvicides) that reduced the larval population. ResultsWhile in isolation, the strength of negative density-dependence and Allee effects did not have a long-term impact on the population dynamics, their combination accelerated population extinction as both the strength of negative density-dependence and Allee effects increased. As Allee effects act on small population sizes, sustained interventions were able to activate Allee effects, increasing the probability of population extinction, but short-term interventions can lead to populations rebounding, driven by negative density-dependence. ConclusionUnderstanding less-studied regulatory processes like Allee effects can support vector control by highlighting aspects of the vectors life cycle that are either resilient or vulnerable to interventions. If present, Allee effects could potentially be harnessed to accelerate the elimination of vectors and diseases such as malaria.
Bartholomee, C.; Sutter, C.; Fournet, F.; Bouhsira, E.; Moiroux, N.
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Nature-Based Solutions are increasingly promoted to address current urban challenges. While their potential effects on vector-borne disease risks have been documented, data on Aedes albopictus, a known arbovirus vector, remain limited in France. A previous study showed that urban vegetation moderately increases the abundance of adult mosquitoes of this species, but the monitoring period lasted only six months. Using ovitraps, we monitored Ae. albopictus egg density dynamics over multiple years (2022 to 2024) and analysed its environmental predictors in various urban environments. We included lagged meteorological variables, land cover metrics, and the cumulated egg densities recorded in the previous weeks as environmental predictors. Both parametric (GLMM) and non-parametric (Random Forest) models were fitted to weekly egg counts per trap. Our findings highlight that (i) egg density dynamics were related to how vegetation classes structured the landscape, (ii) growing degree days and cumulated number of eggs recorded in specific lagged time windows were the main contributors to egg density, and (iii) the non-parametric and parametric models performed similarly in terms of prediction accuracy.
Abbas, M.; kozel, K.; Daramola, O.; Selemetas, N.; Robinson, M. W.; Morgan, E. R.; Chaudhry, U.; Betson, M.
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Fasciolosis caused by Fasciola hepatica is an economically important disease in sheep and cattle. Knowledge of the population genetic structure of F. hepatica is important for understanding gene flow and informing disease control. In the present study, we designed, developed, and validated a multilocus sequence typing (MLST) scheme based on six markers. These markers were selected by aligning newly sequenced whole-genome sequence (WGS) data with available reference genomes and selecting variable regions with five or more single-nucleotide polymorphisms SNPs from different scaffolds of the F. hepatica reference genome Fasciola 10x pilon (GCA_900302435.1). Twenty markers were initially identified, of which 12 were multiplexed for deep amplicon sequencing after validation on worm and faecal eggs DNA; six markers were ultimately retained for downstream population genetics analysis. These markers were used to investigate population genetic structure in 15 cattle- and 27 sheep-derived F. hepatica populations in UK. A total of 53 unique alleles from six MLST markers were identified from 30 faecal (cattle = 13, sheep = 17) and 12 adult worm (cattle = 2, sheep = 10) populations. Shared alleles were observed in sheep- and cattle-derived populations. The highest allelic variation was observed in the Scottish Borders, Southern Scotland, and South-West England, and the lowest in North-West England. Minimal genetic differentiation was observed between cattle- and sheep-derived populations, with most genetic structuring within rather than between populations. Five markers showed high allelic polymorphism, whereas one marker showed low levels of allelic polymorphism, highlighting the importance of multilocus approaches. Overall, this six MLST-marker panel provides a tool for population genetic studies, revealing high gene flow and clonal expansion of F. hepatica across hosts and regions in the UK.
Palinski, R.; Hicks, J. A.; Alfred, J. T.; Thompson, A.; Camp, P. M.; Thomas, J.; Murphy, G.; Robbe-Austerman, S.
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Cochliomyia hominivorax, New world Screwworm (NWS), has become a reemerging veterinary concern in the United States due to the recent northward expansion of fly detections as far as northern Mexico. Rapid, accurate and validated detection pipelines need to be developed in the case of an incursion into the United States. Confirmatory cases are evaluated by morphological identification with no paired test to verify identifications. With the frequency of submissions of non-ideal samples, particularly from fly traps, a molecular tool would be necessary for species identification. In this manuscript, we develop and assess a pipeline including three real-time PCR assays targeting the ribosomal RNA and five sets of Sanger primers targeting the mitochondrial genome that would be used as a paired tool with morphological identification. Two of the assessed real-time PCR assays are highly specific, sensitive and repeatable requiring <1 copy per reaction for detection. Four of the five Sanger primer sets were assessed, optimized and results evaluated for potential use in preliminary geographic analysis of specimens. This workflow will expedite screening of samples, provide a method to verify results using different tools and help understand genetic variations within the mitochondria for NWS outbreaks.